CDS

Accession Number TCMCG029C40853
gbkey CDS
Protein Id XP_023745000.1
Location join(9954..10322,11377..11466,11639..11791,12250..12341,12467..12608,12670..12777,12885..12970,13612..13683,13786..13912,13996..14082,14184..14276,14403..14561,14685..14768,14836..14916,14998..15080,15168..15285,15383..15658)
Gene LOC111893167
GeneID 111893167
Organism Lactuca sativa

Protein

Length 739aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA432228
db_source XM_023889232.1
Definition isoamylase 1, chloroplastic isoform X2 [Lactuca sativa]

EGGNOG-MAPPER Annotation

COG_category G
Description Isoamylase 1
KEGG_TC -
KEGG_Module M00565        [VIEW IN KEGG]
KEGG_Reaction R09995        [VIEW IN KEGG]
R11261        [VIEW IN KEGG]
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01214        [VIEW IN KEGG]
EC 3.2.1.68        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00500        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00500        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0000272        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004133        [VIEW IN EMBL-EBI]
GO:0004553        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0005977        [VIEW IN EMBL-EBI]
GO:0005982        [VIEW IN EMBL-EBI]
GO:0005983        [VIEW IN EMBL-EBI]
GO:0006073        [VIEW IN EMBL-EBI]
GO:0006091        [VIEW IN EMBL-EBI]
GO:0006112        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009251        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010021        [VIEW IN EMBL-EBI]
GO:0010368        [VIEW IN EMBL-EBI]
GO:0015980        [VIEW IN EMBL-EBI]
GO:0016052        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0019156        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043033        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044042        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044247        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044264        [VIEW IN EMBL-EBI]
GO:0044275        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:2000896        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGCATCTGTAATGGAAAAGCTACTTCGATGTGCTTCGTACTCTCCTCTCCACACTCCCAAACTCACGTCTATTCACAATTTTGAATTAAGAAATCCCAACATACATATGAAATGGCGTACTCGGAAGAATAACAATGCTTTAGTGGTAAATGCAAGCGATGGGGGAGGAGGAGGAGGAGAAGTGGATACGGCGGTGGTAGAAAAGGACAAGCCGAAAGTACTGCCGCCGAGGTTTCAGGTTTTACAGGGTTCTCCGATGCCGTTCGGTGCCACAGCTCAGGAAGATGGAGTCAATTTCGCGATATATTCGCGCAATGCCACATCTGCGACTCTATGCTTAATGACTCCCTCCGATTTGCCTGAGGCTGTTTTAAGCAGGGAGGAGTTTGGTGTTTTGGGAGCTGATGATGATTGCTGGAGCCAAATGGCCTGCACAATCCCTTCTAATCATGAGTTTGACTGGGAAGGAGATCTGCCCCTGTCATTTGCACAAAGAGATCTGGTGATTTATGAAATGCATGTTCGTGGATTTACAAGGCATGAGTCCAGTAAGACAGAGTCTCCTGGTACTTACCTTGGTGTAGTGGAAAAACTTGATCATTTAAAGGAACTTGGTGTGAACTGCATAGAGTTAATGCCATGCCATGAGTTCAATGAGCTGGAGTACTTCAGCTACAATCCTGTCTTGGGTGACTACAGGTTAAATTATTGGGGGTATTCAACTATCAATTACTTCTCACCTATGTTGAGATATGCATCTGCTGGTGGTCGTAATGGTGGCCTTGATGCAATAAATGAGTTCAAACAACTTATTAAAGAGGCACACAAACGTGGAATCGAGGTGCTCATGGATGTGGTTTTCAATCACACTGCTGAAGGGAATGAAAATGGTCCCATTTTGTCTTTTCGAGGTGTTGATAACAGTGTCTTTTATATGCTTGCACCTAAGGGAGAGTTCTACAACTATTCAGGATGTGGAAACACATTCAACTGCAACCATCCTATTGTGCGCCAATTTATAGTAGATTCCTTGAGATATTGGGTAACAGAGATGCATGTAGATGGATTTCGATTTGATCTTGCCTCTATCATGACAAGAGGCAGCAGTCTTTTTGATGCAGTAAATGTATATGGAAATCAAGTAGAAGATGATTTACTGACAACCGGCTCACCTCTCACCAACCCACCATTAATTGACATGATTAGCAATGACCCAATACTTCGAGGAGTGAAGCTTATCGCTGAAGCATGGGACTGTGGAGGCCTTTACCAAGTCGGCGTGTTTCCTCACTGGGGTATTTGGTCAGAATGGAATGGAAAGTATCGCGATACAGTAAGGCAGTTCATCAAGGGTACAGATGGATTTTCTGGTGCTTTTGCTGAATGCCTTTGTGGGAGCCCTAATCTATACCAGGAAGGTGGTAGAAAACCATGGAACAGTATAAACTTCATATGTGCACATGATGGCTTTACACTGGCTGACTTAGTTATGTACAATGACAAACATAACCTTGCAAATGGTGAAGACAACAAAGATGGAGAAAGTCACAATAACAGCTGGAATTGCGGACAGGAGGGGGAGTTTGTAAGCATATCAGTGAAGAGATTGAGGAAACGACAGATGAGAAATTTCTTCCTTTGTCTAATGGTTTCACAGGGTGTACCGATGATACATATGGGGGATGAATATGGTCACACAAAAGGGGGAAACAACAACACGTATTGCCATGATAACTATATGAACTACTTCCAGTGGGATAAGAAAGAAGAGTCATCATCAGATTTTTTCAGATTTTGCCGTCTAGTCACCAACTTCCGCCATGAATGTGAGGCGCTTGGCTTAAATGATTTTCCTACAGCTGAAAGGCTACAGTGGCATGGACATGCCCCTGAAACACCAGATTGGTCTGAAACAAGTAGATTTGTGGCTTTCACCATGAAGGATTTGGTGAAAGGAGAGCTATATATCGCCTTCAACACTAGTCATTTAGCGGTTACAATAACATTGCCTGAAAGACCAGGGTGCAGGTGGCAACCATTGGTGGACACCAGCAAGACTGCACCATTTGATTTTCTAAGTGATGATGTTCCAGAAAGAGAAAGAGAGGTGGCCATGAAACAATATGCACAGTTTCTTGATGGGAATTTGTATCCTATGCTTAGCTATTCCTCTATAATCTTATTACTCACTCCTGATGTAAGTGGTTTAATCTGA
Protein:  
MDASVMEKLLRCASYSPLHTPKLTSIHNFELRNPNIHMKWRTRKNNNALVVNASDGGGGGGEVDTAVVEKDKPKVLPPRFQVLQGSPMPFGATAQEDGVNFAIYSRNATSATLCLMTPSDLPEAVLSREEFGVLGADDDCWSQMACTIPSNHEFDWEGDLPLSFAQRDLVIYEMHVRGFTRHESSKTESPGTYLGVVEKLDHLKELGVNCIELMPCHEFNELEYFSYNPVLGDYRLNYWGYSTINYFSPMLRYASAGGRNGGLDAINEFKQLIKEAHKRGIEVLMDVVFNHTAEGNENGPILSFRGVDNSVFYMLAPKGEFYNYSGCGNTFNCNHPIVRQFIVDSLRYWVTEMHVDGFRFDLASIMTRGSSLFDAVNVYGNQVEDDLLTTGSPLTNPPLIDMISNDPILRGVKLIAEAWDCGGLYQVGVFPHWGIWSEWNGKYRDTVRQFIKGTDGFSGAFAECLCGSPNLYQEGGRKPWNSINFICAHDGFTLADLVMYNDKHNLANGEDNKDGESHNNSWNCGQEGEFVSISVKRLRKRQMRNFFLCLMVSQGVPMIHMGDEYGHTKGGNNNTYCHDNYMNYFQWDKKEESSSDFFRFCRLVTNFRHECEALGLNDFPTAERLQWHGHAPETPDWSETSRFVAFTMKDLVKGELYIAFNTSHLAVTITLPERPGCRWQPLVDTSKTAPFDFLSDDVPEREREVAMKQYAQFLDGNLYPMLSYSSIILLLTPDVSGLI